Publications

Results: 265 / 265

2026

Journal articles

The AI interviewer: multi-faceted evaluation of adaptive questioning by large language models

A. Panfilova, V. Bolshev, M. Mozikov, V. Latynov, A. Vanin, T. Nestik, V. Nourkova, A. Vlasova, M. Kozin, A. Serohvostov, E. Tarasova, S.I. Nikolenko

Scientific Reports · vol. 16 (1) · article 20257 · 2026

Искусственный интеллект и олимпиадная математика

S.I. Nikolenko

Математическое просвещение, серия 3 · vol. 37 · pp. 7–43 · 2026 · In Russian

MultiCAT-Bench: A Multi-Categorical Agent Tool Use Benchmark

A. Vyatkin, A. Poptsov, V. Oliseenko, E. Veiber, O. Shutko, T. Rafikov, M. Abramov, S.I. Nikolenko

IEEE Access · vol. 14 · pp. 116038–116061 · 2026

Toward Psychological Digital Twins: Evaluating Large Language Models for Simulating Assessment Responses From Interview Data

A. Panfilova, V. Bolshev, M. Mozikov, V. Latynov, A. Vanin, T. Nestik, M. Kozin, A. Serohvostov, E. Tarasova, S.I. Nikolenko

IEEE Access · vol. 14 · pp. 121682–121704 · 2026

Conference papers

Beyond Isolated Clients: Integrating Graph-Based Embeddings into Event Sequence Models

H. Proshian, N. Severin, S.I. Nikolenko, I. Kireev, A. Savchenko, I. Sergeev, M. Postnova, I. Makarov

Proceedings of the ACM Web Conference 2026 · WWW 2026 · pp. 8465–8468

Preprints

KyrgyzLLM-Bench: Benchmarking Kyrgyz Language Understanding

T. Turatali, A. Turdubaeva, R. Izmailov, A. Alekseev, S.I. Nikolenko

arXiv · 2026

AgentLens: Production-Assessed Trajectory Reviews for Coding Agent Evaluation

A. Podivilov, V. Lomshakov, S. Savin, M. Startsev, R. Pozharskiy, M. Parshin, S.I. Nikolenko

arXiv · 2026

Query2Diagram: Answering Developer Queries with UML Diagrams

O. Baryshnikov, A. Alekseev, S.I. Nikolenko

arXiv · 2026

Sparse Prefix Caching for Hybrid and Recurrent LLM Serving

M. Shirokikh, S.I. Nikolenko

arXiv · 2026

2025

Books

Machine Learning: The Basics

S.I. Nikolenko

Piter · 2025

Journal articles

Fusing Predictive and Large Language Models for Actionable Recommendations In Creative Marketing

Q. Yang, A. Farseev, M. Ongpin, A. Huang, Y. Chu-Farseeva, D. You, K. Lepikhin, S.I. Nikolenko

ACM Transactions on Information Systems · vol. 43 (5) · pp. 1–31 · 2025

Early Warning Prediction with Automatic Labelling in Epilepsy Patients

P. Zhang, T. Gao, J. Guo, J. Duan, S.I. Nikolenko

The ANZIAM Journal · vol. 67 · article e4 · 2025

Conference papers

MindFuse: Towards GenAI Explainability in Marketing Strategy Co-Creation

A. Farseev, M. Ongpin, Q. Yang, I. Gossoudarev, Y. Chu-Farseeva, S.I. Nikolenko

33rd ACM International Conference on Multimedia · ACM MM 2025 · pp. 12409–12418

Human-Annotated NER Dataset for the Kyrgyz Language

T. Turatali, A. Alekseev, G. Jumalieva, G. Kabaeva, S.I. Nikolenko

10th International Conference on Computer Science and Engineering · IEEE UBMK 2025 · pp. 1607–1612

ToolReflection: Improving Large Language Models for Real-World API Calls with Self-Generated Data

G. Polyakov, I.S. Alimova, D. Abulkhanov, I. Sedykh, A. Bout, S.I. Nikolenko, I. Piontkovskaya

1st Workshop for Research on Agent Language Models · REALM 2025 · pp. 184–199

LAMeD: LLM-generated Annotations for Memory Leak Detection

E. Shemetova, I. Smirnov, A. Alekseev, I. Shenbin, A. Rukhovich, S.I. Nikolenko, V. Lomshakov, I. Piontkovskaya

2025 International Conference on Evaluation and Assessment in Software Engineering · EASE 2025 · pp. 1024–1034

CGFE: Efficient Range Encoding for TCAMs

J. Graf, V. Demianiuk, P. Chuprikov, Y. Feiran, S.I. Nikolenko, P. Eugster

IEEE International Conference on Computer Communications · INFOCOM 2025

CCT-Code: Cross-Consistency Training for Multilingual Clone Detection and Code Search

N. Sorokin, A. Tikhonov, D. Abulkhanov, I. Piontkovskaya, I. Sedykh, S.I. Nikolenko, V. Malykh

Proceedings of the 2025 Conference of the Nations of the Americas Chapter of the Association for Computational Linguistics: Human Language Technologies · NAACL 2025 · ACM

SOEX: Explainable AI for Competitor Communications Analytics

A. Farseev, S.I. Nikolenko, Q. Yang, K. Lepikhin, D. You, Y. Chu-Farseeva, I. Gossoudarev, M. Ongpin

Companion Proceedings of the ACM on Web Conference 2025 · WWW 2025 · pp. 2823–2826

Patents

Automated actionable insights and content generation based upon large language models, multi-view machine learning, and generative models

A. Farseev, M. Ongpin, Q. Yang, A. Huang, S.I. Nikolenko, K. Lepikhin, Y. Chu-Farseeva

№ US20250045802A1 · published

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2024

Journal articles

Syntactic Transfer to Kyrgyz Using the Treebank Translation Method

A. Alekseev, A. Tillabaeva, G. Kabaeva, S.I. Nikolenko

Zapiski nauchnyh seminarov POMI · pp. 252–275 · 2024 · In Russian

Large Language Models for Source Code Generation and Editing

V. Lomshakov, S.I. Nikolenko

Zapiski nauchnyh seminarov POMI · pp. 276–350 · 2024 · In Russian

Conference papers

∇²DFT: A Universal Quantum Chemistry Dataset of Drug-Like Molecules and a Benchmark for Neural Network Potentials

K. Khrabrov, A. Ber, A. Tsypin, K. Ushenin, E. Rumiantsev, A. Telepov, D. Protasov, I. Shenbin, A. Alekseev, M. Shirokikh, S.I. Nikolenko, E. Tutubalina, A. Kadurin

Proceedings of the 38th Annual Conference on Neural Information Processing Systems · NeurIPS 2024

Toolken+: Improving LLM Tool Usage with Reranking and a Reject Option

K. Yakovlev, S.I. Nikolenko, A. Bout

Proceedings of the 2024 Conference on Empirical Methods in Natural Language Processing · EMNLP 2024

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ProConSuL: Project Context for Code Summarization with LLMs

V. Lomshakov, A. Podivilov, S. Savin, O. Baryshnikov, A. Lisevych, S.I. Nikolenko

Proceedings of the 2024 Conference on Empirical Methods in Natural Language Processing · EMNLP 2024

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Robust AI-Generated Text Detection by Restricted Embeddings

K. Kuznetsov, E. Tulchinskii, L. Kushnareva, G. Magai, S. Barannikov, S.I. Nikolenko, I. Piontkovskaya

Proceedings of the 2024 Conference on Empirical Methods in Natural Language Processing · EMNLP 2024

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STIR: Siamese Transformer for Image Retrieval Postprocessing

A. Shabanov, A. Tarasov, S.I. Nikolenko

Proceedings of the 33rd ACM International Conference on Information and Knowledge Management · CIKM 2024

Boundary detection in mixed AI-human texts

L. Kushnareva, T. Gaintseva, D. Abulkhanov, K. Kuznetsov, G. Magai, E. Tulchinskii, S. Barannikov, S.I. Nikolenko, I. Piontkovskaya

Proceedings of the 2024 Conference on Language Modeling · COLM 2024

★ COLM 2024 Outstanding Paper Award

Neural Click Models for Recommender Systems

M. Shirokikh, I. Shenbin, A. Alekseev, A. Volodkevich, A. Vasilev, A. Savchenko, S.I. Nikolenko

Proceedings of the 47th International ACM SIGIR Conference on Research and Development in Information Retrieval · SIGIR 2024 · pp. 2553–2558

ImplicitSLIM and How it Improves Embedding-based Collaborative Filtering

I. Shenbin, S.I. Nikolenko

Proceedings of the 12th International Conference on Learning Representations · ICLR 2024

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Searching by Code: a New SearchBySnippet Dataset and SnippeR Retrieval Model for Searching by Code Snippets

I. Sedykh, N. Sorokin, D. Abulkhanov, S.I. Nikolenko, V. Malykh

Proceedings of the 2024 Joint International Conference on Computational Linguistics, Language Resources and Evaluation · LREC-COLING 2024 · pp. 14472–14477

Preprints

SOMONITOR: Explainable Marketing Data Processing and Analysis with Large Language Models

A. Farseev, Q. Yang, M. Ongpin, I. Gossoudarev, Y. Chu-Farseeva, S.I. Nikolenko

arXiv · 2024

Improving Interpretability and Robustness for the Detection of AI-Generated Images

T. Gaintseva, L. Kushnareva, G. Magai, I. Piontkovskaya, S.I. Nikolenko, M. Benning, S. Barannikov, G. Slabaugh

arXiv · 2024

2023

Journal articles

Blending of Predictions Boosts Understanding for Multimodal Advertisements

A. Alekseev, A. Savchenko, E. Tutubalina, E. Myasnikov, S.I. Nikolenko

Zapiski nauchnyh seminarov POMI · pp. 176–196 · 2023

English journal version: Journal of Mathematical Sciences, 285(1), 126–141 (2024)

User Response Modeling in Recommender Systems: A Survey

M. Shirokikh, I. Shenbin, A. Alekseev, A. Volodkevich, A. Vasilev, S.I. Nikolenko

Zapiski nauchnyh seminarov POMI · pp. 141–190 · 2023

English journal version: Journal of Mathematical Sciences, 285(2), 255–293 (2024)

Conference papers

Intrinsic Dimension Estimation for Robust Detection of AI-Generated Texts

E. Tulchinskii, K. Kuznetsov, L. Kushnareva, D. Cherniavskii, S.I. Nikolenko, I. Piontkovskaya, S. Barannikov, E. Burnaev

37th Conference on Neural Information Processing Systems · NeurIPS 2023

Efficient Grammatical Error Correction Via Multi-Task Training and Optimized Training Schedule

A. Bout, A. Podolskiy, S.I. Nikolenko, I. Piontkovskaya

Proceedings of the 2023 Conference on Empirical Methods in Natural Language Processing · EMNLP 2023 · pp. 5800–5816

Against Opacity: Explainable AI and Large Language Models for Effective Digital Advertising

Q. Yang, M. Ongpin, S.I. Nikolenko, A. Huang, A. Farseev

Proceedings of the 31st ACM International Conference on Multimedia · MM 2023 · pp. 9299–9305

Topological Data Analysis for Speech Processing

E. Tulchinskii, K. Kuznetsov, L. Kushnareva, D. Cherniavskii, S. Barannikov, I. Piontkovskaya, S.I. Nikolenko, E. Burnaev

Proceedings of the 24th INTERSPEECH · INTERSPEECH 2023 · pp. 311–315

Sinkhorn Transformations for Single-Query Postprocessing in Text-Video Retrieval

K. Yakovlev, G. Polyakov, I.S. Alimova, A. Podolskiy, A. Bout, S.I. Nikolenko, I. Piontkovskaya

Proceedings of the 46th International ACM SIGIR Conference on Research and Development in Information Retrieval · SIGIR 2023 · pp. 2394–2398

LAPCA: Language-Agnostic Pretraining with Cross-Lingual Alignment

D. Abulkhanov, N. Sorokin, S.I. Nikolenko, V. Malykh

Proceedings of the 46th International ACM SIGIR Conference on Research and Development in Information Retrieval · SIGIR 2023 · pp. 2098–2102

GEC-DePenD: Non-Autoregressive Grammatical Error Correction with Decoupled Permutation and Decoding

K. Yakovlev, A. Podolskiy, A. Bout, S.I. Nikolenko, I. Piontkovskaya

Proceedings of the 61st Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers) · ACL 2023 · pp. 1546–1558

Fine-Tuning Large Language Models for Answering Programming Questions with Code Snippets

V. Lomshakov, S. Kovalchuk, M. Omelchenko, S.I. Nikolenko, A. Aliev

Proceedings of the International Conference on Computational Science 2023 · ICCS 2023 · pp. 171–179

Benchmarking Multi-Label Topic Classification in Kyrgyz Language

A. Alekseev, S.I. Nikolenko, G. Kabaeva

Proceedings of the 11th International Conference on Analysis of Images, Social Networks and Texts · AIST 2023

SoCraft: Advertiser-level Predictive Scoring for Creative Performance on Meta

A. Huang, Q. Yang, S.I. Nikolenko, M. Ongpin, I. Gossoudarev, N.Y. Duong, K. Lepikhin, S. Vishnyakov, Y. Chu-Farseeva, A. Farseev

Proceedings of the Sixteenth ACM International Conference on Web Search and Data Mining · WSDM 2023 · pp. 1132–1135

"Just To See You Smile": SMILEY, a Voice-Guided GAN

Q. Yang, C. Tzelepis, S.I. Nikolenko, I. Patras, A. Farseev

Proceedings of the Sixteenth ACM International Conference on Web Search and Data Mining · WSDM 2023 · pp. 1196–1199

Preprints

Machine Learning for SAT: Restricted Heuristics and New Graph Representations

M. Shirokikh, I. Shenbin, A. Alekseev, S.I. Nikolenko

arXiv · 2023

Searching by Code: a New SearchBySnippet Dataset and SnippeR Retrieval Model for Searching by Code Snippets

I. Sedykh, D. Abulkhanov, N. Sorokin, S.I. Nikolenko, V. Malykh

arXiv · 2023

2022

Journal articles

nablaDFT: Large-Scale Conformational Energy and Hamiltonian Prediction benchmark and dataset

K. Khrabrov, I. Shenbin, A. Ryabov, A. Tsypin, A. Telepov, A. Alekseev, A. Grishin, P. Strashnov, P. Zhilyaev, S.I. Nikolenko, A. Kadurin

Physical Chemistry Chemical Physics · pp. 25853–25863 · 2022

Self-supervised recurrent depth estimation with attention mechanisms

I. Makarov, M. Bakhanova, S.I. Nikolenko, O. Gerasimova

PeerJ Computer Science · article e865 · 2022

Do we behave differently on Twitter and Facebook: Multi-view social network user personality profiling for content recommendation

Q. Yang, A. Farseev, S.I. Nikolenko, A. Filchenkov

Frontiers in Big Data · pp. 931206 · 2022

Open-set face identification with automatic detection of out-of-distribution images

A. Sokolova, A. Savchenko, S.I. Nikolenko

Computer Optics · pp. 801–807 · 2022 · In Russian

Conference papers

DetIE: Multilingual Open Information Extraction Inspired by Object Detection

M. Vasilkovsky, A. Alekseev, V. Malykh, I. Shenbin, E. Tutubalina, D. Salikhov, M. Stepnov, A. Chertok, S.I. Nikolenko

Proceedings of the 36th AAAI Conference on Artificial Intelligence · AAAI-22 · 2022

RuCCoN: Clinical Concept Normalization in Russian

A. Nesterov, G. Zubkova, Z. Miftakhutdinov, V. Kokh, E. Tutubalina, A. Shelmanov, A. Alekseev, M. Avetisian, A. Chertok, S.I. Nikolenko

Findings of the Association for Computational Linguistics: ACL 2022 · ACL Findings 2022 · pp. 239–245

Personality-Driven Social Multimedia Content Recommendation

Q. Yang, S.I. Nikolenko, A. Huang, A. Farseev

Proceedings of the 30th ACM International Conference on Multimedia · MM 2022 · pp. 7290–7299

Medical Crossing: a Cross-lingual Evaluation of Clinical Entity Linking

A. Alekseev, Z. Miftakhutdinov, E. Tutubalina, A. Shelmanov, V. Ivanov, V. Kokh, A. Nesterov, M. Avetisian, A. Chertok, S.I. Nikolenko

Proceedings of the Thirteenth Language Resources and Evaluation Conference · LREC 2022 · pp. 4212–4220

Patents

Topic models with sentiment priors based on distributed representations

E. Tutubalina, S.I. Nikolenko

№ US11379668B2 · 2022 · granted

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Other

2021

Books

Synthetic Data for Deep Learning

S.I. Nikolenko

Springer · 2021

Journal articles

Cross-Domain Limitations of Neural Models on Biomedical Relation Classification

I.S. Alimova, E. Tutubalina, S.I. Nikolenko

IEEE Access · pp. 1432–1439 · 2021

Computational Discovery of TTF Molecules with Deep Generative Models

A. Yakubovich, A. Odinokov, S.I. Nikolenko, Y. Jung, H. Choi

Frontiers in Chemistry · 2021

Approximate Packet Classifiers With Controlled Accuracy

V. Demianiuk, K. Kogan, S.I. Nikolenko

IEEE Transactions on Networking · pp. 1141–1154 · 2021

Formalization and taxonomy of compute-aggregate problems for cloud computing applications

P. Chuprikov, A. Davydow, K. Kogan, S.I. Nikolenko, A.V. Sirotkin

Computer Networks · 2021

Competitive buffer management for packets with latency constraints

A. Davydow, P. Chuprikov, S.I. Nikolenko, K. Kogan

Computer Networks · 2021

Recovering Word Forms by Context for Morphologically Rich Languages

A. Alekseev, S.I. Nikolenko

Zapiski nauchnyh seminarov POMI · pp. 129–136 · 2021

Deep Learning for Natural Language Processing: A Survey

E. Arkhangelskaya, S.I. Nikolenko

Zapiski nauchnyh seminarov POMI · pp. 137–205 · 2021

Word-based Russian text augmentation for character-level models

R. Galinsky, A. Alekseev, S.I. Nikolenko

Zapiski nauchnyh seminarov POMI · pp. 206–221 · 2021

Topic Models with Sentiment Priors Based on Distributed Representations

E. Tutubalina, S.I. Nikolenko

Zapiski nauchnyh seminarov POMI · pp. 284–301 · 2021

Robust Distributed Monitoring of Traffic Flows

V. Demianiuk, S. Gorinsky, S.I. Nikolenko, K. Kogan

IEEE Transactions on Networking · pp. 275–288 · 2021

The Russian Drug Reaction Corpus and neural models for drug reactions and effectiveness detection in user reviews.

E. Tutubalina, I.S. Alimova, Z. Miftakhutdinov, A. Sakhovskiy, V. Malykh, S.I. Nikolenko

Bioinformatics · pp. 243–249 · 2021

Conference papers

Near-Zero-Shot Suggestion Mining with a Little Help from WordNet

A. Alekseev, E. Tutubalina, S. Kwon, S.I. Nikolenko

Proceedings of the 10th International Conference on Analysis of Images, Social Networks and Texts · AIST 2021 · pp. 23–36 · Springer

SRPT-based Congestion Control for Flows with Unknown Sizes

A. Davydow, S.I. Nikolenko, V. Demianiuk, P. Chuprikov, K. Kogan

2021 IFIP Networking Conference (IFIP Networking) · pp. 1–10

Preprints

Towards General Purpose Geometry-Preserving Single-View Depth Estimation

M. Romanov, N. Patatkin, A. Vorontsova, S.I. Nikolenko, A. Konushin, D. Senyushkin

arXiv · 2021

2020

Journal articles

Molecular Sets (MOSES): A Benchmarking Platform for Molecular Generation Models

D. Polykovskiy, A. Zhebrak, B. Sanchez-Lengeling, S. Golovanov, O. Tatanov, S. Belyaev, R. Kurbanov, A. Artamonov, V. Aladinsky, M. Veselov, A. Kadurin, S.I. Nikolenko, A. Aspuru-Guzlik, A. Zhavoronkov

Frontiers in Pharmacology · 2020

Towards Software-Defined Buffer Management

K. Kogan, D. Menikkumbura, G. Petri, Y. Noh, S.I. Nikolenko, A.V. Sirotkin, P. Eugster

IEEE Transactions on Networking · pp. 2337–2349 · 2020

Towards Declarative Self-Adapting Buffer Management

P. Chuprikov, S.I. Nikolenko, K. Kogan

ACM SIGCOMM Computer Communication Review · pp. 30–37 · 2020

DeepCycle reconstructs a cyclic cell cycle trajectory from unsegmented cell images using convolutional neural networks

L. Rappez, A. Rakhlin, A. Rigopoulos, S.I. Nikolenko, T. Alexandrov

Molecular Systems Biology · article e9474 · 2020

New Alternatives to Optimize Policy Classifiers

V. Demianiuk, S.I. Nikolenko, P. Chuprikov, K. Kogan

IEEE Transactions on Networking · pp. 1088–1101 · 2020

ColocML: Machine learning quantifies co-localization between mass spectrometry images

K. Ovchinnikova, A. Rakhlin, L. Stuart, S.I. Nikolenko, T. Alexandrov

Bioinformatics · 2020

Molecular Generation for Desired Transcriptome Changes with Adversarial Autoencoders

R. Shayakhmetov, M. Kuznetsov, A. Zhebrak, A. Kadurin, I. Baskov, S.I. Nikolenko, A. Aliper, D. Polykovskiy

Frontiers in Pharmacology · 2020

Conference papers

Recognizing Preferred Grammatical Gender in Russian Anonymous Online Confessions

A. Alekseev, S.I. Nikolenko

23rd International Conference on Text, Speech, and Dialogue · TSD 2020 · pp. 222–230

High-Resolution Daytime Translation Without Domain Labels

I. Anokhin, P. Solovev, D. Korzhenkov, A. Kharlamov, T. Khakhulin, A. Silvestrov, S.I. Nikolenko, V. Lempitsky, G. Sterkin

2020 IEEE Conference on Computer Vision and Pattern Recognition · CVPR 2020 · pp. 7488–7497

RecVAE: A New Variational Autoencoder for Top-N Recommendations with Implicit Feedback

I. Shenbin, A. Alekseev, E. Tutubalina, V. Malykh, S.I. Nikolenko

13th International Conference on Web Search and Data Mining · WSDM 2020 · pp. 528–536

Ad Lingua: Text Classification Improves Symbolism Prediction in Image Advertisements

A. Savchenko, A. Alekseev, S. Kwon, E. Tutubalina, E. Myasnikov, S.I. Nikolenko

28th International Conference on Computational Linguistics · COLING 2020 · pp. 1886–1892

Patents

System and method for domain adaptation using synthetic data

S.I. Nikolenko, Y. Behzadi

№ US20200320347A1

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Plausible dayscale timelapse generation method and computing device

G. Sterkin, I. Anokhin, T. Khakhulin, A. Kharlamov, D. Korzhenkov, V. Lempitsky, S.I. Nikolenko, A. Silvestrov, P. Solovev

№ WO2021096191A1 · 2020

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Joint unsupervised object segmentation and inpainting

P. Ostyakov, R. Suvorov, E. Logacheva, O. Khomenko, S.I. Nikolenko

№ WO2020101246A1

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2019

Books

Foundations of the Bayesian Networks Theory

A.L. Tulupyev, S.I. Nikolenko, A.V. Sirotkin

SPSU Press, St. Petersburg · 2019

Conference papers

Breast Tumor Cellularity Assessment using Deep Neural Networks

A. Rakhlin, A.A. Shvets, A.A. Kalinin, A. Tiulpin, V.I. Iglovikov, S.I. Nikolenko

ICCV 2019 Workshop «Visual Recognition for Medical Images» · ICCVW 2019

Free-Lunch Saliency via Attention in Atari Agents

D. Nikulin, A. Ianina, A. Aliev, S.I. Nikolenko

ICCV 2019 Workshop «Interpreting and Explaining Visual Artificial Intelligence Models» · ICCVW 2019

Rendering Atmospheric Clouds with Latent Space Light Probes

M. Panin, S.I. Nikolenko

12th ACM SIGGRAPH Conference and Exhibition on Computer Graphics & Interactive Techniques in Asia · SIGGRAPH ASIA 2019 · pp. 21–24

Improving unsupervised neural aspect extraction for online discussions using out-of-domain classification

A. Alekseev, E. Tutubalina, V. Malykh, S.I. Nikolenko

7th International Symposium on Language and Knowledge Engineering · LKE 2019

Robust Distributed Monitoring of Traffic Flows

V. Demianiuk, S. Gorinsky, S.I. Nikolenko, K. Kogan

27th IEEE International Conference on Network Protocols · ICNP 2019 · pp. 1–11

Large-Scale Transfer Learning for Natural Language Generation

S. Golovanov, R. Kurbanov, S.I. Nikolenko, K. Truskovskyi, A. Tselousov, T. Wolf

57th Annual Meeting of the Association for Computational Linguistics · ACL 2019 · pp. 6053–6058

Lost in Conversation: A Conversational Agent Based on the Transformer and Transfer Learning

S. Golovanov, A. Tselousov, R. Kurbanov, S.I. Nikolenko

The NeurIPS '18 Competition · pp. 295–315 · 2019

The Inclusive Images Competition

J. Atwood, Y. Halpern, P. Baljekar, E. Breck, D. Sculley, P. Ostyakov, S.I. Nikolenko, I. Ivanov, R. Solovyev, W. Wang, M. Skalic

The NeurIPS '18 Competition · pp. 155–186 · 2019

AspeRa: Aspect-Based Rating Prediction Model

A. Alekseev, S.I. Nikolenko, E. Tutubalina, I. Shenbin, V. Malykh

41st European Conference on Information Retrieval · ECIR 2019 · pp. 163–171

Approximate Classifiers with Controlled Accuracy

V. Demianiuk, K. Kogan, S.I. Nikolenko

38th IEEE International Conference on Computer Communications · INFOCOM 2019 · pp. 2044–2052

Wear the Right Head: Comparing Strategies for Encoding Sentences for Aspects Extraction

V. Malykh, A. Alekseev, S.I. Nikolenko, E. Tutubalina, I. Shenbin

8th International Conference on Analysis of Images, Social networks and Texts · AIST 2019 · accepted

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Book chapters

Teeth and Landmarks Detection and Classification Based on Deep Neural Networks

L.N. Tuzova, D.V. Tuzoff, S.I. Nikolenko, A.S. Krasnov

Computational Techniques for Dental Image Analysis · pp. 129–150 · IGI Global · 2019

Preprints

Synthetic Data for Deep Learning

S.I. Nikolenko

arXiv · 2019

CommentsRadar: Dive into Unique Data on All Comments on the Web

S.I. Nikolenko, E. Tutubalina, Z. Miftakhutdinov, E. Beloded

arXiv · 2019

New Competitiveness Bounds for the Shared Memory Switch

I. Bochkov, A. Davydow, N. Gaevoy, S.I. Nikolenko

arXiv · 2019

2018

Journal articles

Priority Queueing for Packets with Two Characteristics

P. Chuprikov, S.I. Nikolenko, K. Kogan, A. Davydow

IEEE Transactions on Networking · pp. 342–355 · 2018

Admission Control in Shared Memory Switches

P. Eugster, A. Kesselman, K. Kogan, S.I. Nikolenko, A.V. Sirotkin

Journal of Scheduling · pp. 533–543 · 2018

Sequence Learning with RNNs for Medical Concept Normalization in User-Generated Texts

E. Tutubalina, Z. Miftakhutdinov, S.I. Nikolenko, V. Malykh

Journal of Biomedical Informatics · pp. 93–102 · 2018

Medical Concept Normalization in Social Media Posts with Recurrent Neural Networks

E. Tutubalina, Z. Miftakhutdinov, S.I. Nikolenko, V. Malykh

Journal of Biomedical Informatics · pp. 217 · 2018

3D Molecular Representations Based on the Wave Transform for Convolutional Neural Networks

D. Kuzminykh, D. Polykovskiy, A. Kadurin, A. Zhebrak, I. Baskov, S.I. Nikolenko, R. Shayakhmetov, A. Zhavoronkov

Molecular Pharmaceutics · pp. 4378–4385 · 2018

Exploring convolutional neural networks and topic models for user profiling from drug reviews

E. Tutubalina, S.I. Nikolenko

Multimedia Tools and Applications · pp. 4791–4809 · 2018

Exploring semantic analysis of biomedical texts for identification of drugs with similar therapeutic effects

R.I. Nugmanov, E. Tutubalina, Z. Miftakhutdinov, T.I. Madzhidov, S.I. Nikolenko, I.S. Alimova, A.E. Tropsha

European Journal of Clinical Investigation · pp. 217 · 2018

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Conference papers

Concorde: Morphological Agreement in Conversational Models

D. Polykovskiy, D. Soloviev, S.I. Nikolenko

10th Asian Conference on Machine Learning · ACML 2018 · pp. 407–421

New Alternatives to Optimize Policy Classifiers

V. Demianiuk, S.I. Nikolenko, P. Chuprikov, K. Kogan

26th IEEE International Conference on Network Protocols · ICNP 2018 · pp. 121–131

Land Cover Classification With Superpixels and Jaccard Index Post-Optimization

A. Davydow, S.I. Nikolenko

Proc. IEEE Conference on Computer Vision and Pattern Recognition 2018 Workshops · CVPR 2018 Workshops · pp. 280–284

Building Detection From Satellite Imagery Using a Composite Loss Function

S. Golovanov, R. Kurbanov, A. Artamonov, A. Davydow, S.I. Nikolenko

Proc. IEEE Conference on Computer Vision and Pattern Recognition 2018 Workshops · CVPR 2018 Workshops · pp. 229–232

Land Cover Classification From Satellite Imagery With U-Net and Lovasz-Softmax Loss

A. Rakhlin, A. Davydow, S.I. Nikolenko

Proc. IEEE Conference on Computer Vision and Pattern Recognition 2018 Workshops · CVPR 2018 Workshops · pp. 262–266

Formalizing Compute-Aggregate Problems in Cloud Computing

P. Chuprikov, A. Davydow, K. Kogan, S.I. Nikolenko, A.V. Sirotkin

25th International Colloquium on Structural Information and Communication Complexity · SIROCCO 2018 · pp. 377–391

Distributed Counting along Lossy Paths Without Feedback

V. Demianiuk, S. Gorinsky, S.I. Nikolenko, K. Kogan

25th International Colloquium on Structural Information and Communication Complexity · SIROCCO 2018 · pp. 30–33

How to implement complex policies on existing network infrastructure

P. Chuprikov, K. Kogan, S.I. Nikolenko

Proc. 4th Symposium on SDN Research · SOSR 2018 · pp. 1–8 · ACM

Personal Insights on Three Research Directions in Networked Systems

K. Kogan, S.I. Nikolenko, V. Demianiuk, P. Chuprikov, A. Davydow

Proc. 10th International Conference on Communication Systems and Networks · COMSNETS 2018 · pp. 1–8 · IEEE

Preprints

SEIGAN: Towards Compositional Image Generation by Simultaneously Learning to Segment, Enhance, and Inpaint

P. Ostyakov, R. Suvorov, E. Logacheva, O. Khomenko, S.I. Nikolenko

arXiv · 2018

Learning State Representations in Complex Systems with Multimodal Data

P. Solovev, A. Aliev, P. Ostyakov, G. Sterkin, E. Logacheva, S. Troeshestov, R. Suvorov, A. Mashikhin, O. Khomenko, S.I. Nikolenko

arXiv · 2018

Label Denoising with Large Ensembles of Heterogeneous Neural Networks

P. Ostyakov, E. Logacheva, R. Suvorov, A. Aliev, G. Sterkin, O. Khomenko, S.I. Nikolenko

arXiv · 2018

2017

Books

Deep Learning

S.I. Nikolenko, A. Kadurin, E. Arkhangelskaya

Piter · 2017

Journal articles

FDR-controlled metabolite annotation for high-resolution imaging mass spectrometry

A. Palmer, P. Phapale, I. Chernyavsky, R. Lavigne, D. Fay, A. Tarasov, V. Kovalev, J. Fuchser, S.I. Nikolenko, C. Pineau, M. Becker, T. Alexandrov

Nature Methods · pp. 57–60 · 2017

Heterogeneous Packet Processing in Shared Memory Buffers

P. Eugster, K. Kogan, S.I. Nikolenko, A.V. Sirotkin

Journal of Parallel and Distributed Computing · pp. 1–12 · 2017

Efficient FIB Representations on Distributed Platforms

K. Kogan, S.I. Nikolenko, P. Eugster, A. Shalimov, O. Rottenstreich

IEEE Transactions on Networking · pp. 3309–3322 · 2017

Using Semantic Analysis of Texts for the Identification of Drugs with Similar Therapeutic Effects

E. Tutubalina, Z. Miftakhutdinov, R.I. Nugmanov, T.I. Madzhidov, S.I. Nikolenko, I.S. Alimova, A.E. Tropsha

Russian Chemical Bulletin · pp. 2180–2189 · 2017

The Impact of Processing Order on Performance: A Taxonomy of Semi-FIFO Policies

K. Kogan, A. Lòpez-Ortiz, S.I. Nikolenko, A.V. Sirotkin

Journal of Computer and System Sciences · pp. 220–235 · 2017

druGAN: An Advanced Generative Adversarial Autoencoder Model for de Novo Generation of New Molecules with Desired Molecular Properties in Silico

A. Kadurin, S.I. Nikolenko, K. Khrabrov, A. Aliper, A. Zhavoronkov

Molecular Pharmaceutics · pp. 3098–3104 · 2017

Who’s Bad? Attitudes Toward Resettlers From the Post-Soviet South Versus Other Nations in the Russian Blogosphere

S. Bodrunova, O. Koltsova, S. Koltsov, S.I. Nikolenko

International Journal of Communication · pp. 3242–3264 · 2017

Topic Modelling for Qualitative Studies

S.I. Nikolenko, O. Koltsova, S. Koltsov

Journal of Information Science · pp. 88–102 · 2017

Demographic Prediction based on User Reviews about Medications

E. Tutubalina, S.I. Nikolenko

Computación y Sistemas · pp. 227–241 · 2017

Word Embeddings of User Profiling in Online Social Networks

A. Alekseev, S.I. Nikolenko

Computación y Sistemas · pp. 203–226 · 2017

Conference papers

Network Simplification Preserving Bandwidth and Routing Capabilities

S.I. Nikolenko, K. Kogan, A. Fernàndez Anta

2017 IEEE International Conference on Computer Communications · INFOCOM 2017

Throughput Optimization with Latency Constraints

A. Davydow, P. Chuprikov, S.I. Nikolenko, K. Kogan

2017 IEEE International Conference on Computer Communications · INFOCOM 2017

General Ternary Bit Strings on Commodity Longest-Prefix-Match Infrastructures

P. Chuprikov, K. Kogan, S.I. Nikolenko

25th IEEE International Conference on Network Protocols · ICNP 2017

A Programmable Buffer Management Platform

K. Kogan, D. Menikkumbura, G. Petri, Y. Noh, S.I. Nikolenko, A.V. Sirotkin, P. Eugster

25th IEEE International Conference on Network Protocols · ICNP 2017

Planning in Compute-Aggregate Problems as Optimization Problems on Graphs

P. Chuprikov, A. Davydow, K. Kogan, S.I. Nikolenko, A.V. Sirotkin

25th IEEE International Conference on Network Protocols · ICNP 2017

2016

Journal articles

Communities of co-commenting in the Russian LiveJournal and their topical coherence

O. Koltsova, S. Koltsov, S.I. Nikolenko

Internet Research · pp. 710–732 · 2016

Online Scheduling FIFO Policies with Admission and Push-Out

K. Kogan, A. Lòpez-Ortiz, S.I. Nikolenko, A.V. Sirotkin

Theory of Computing Systems · pp. 322–344 · 2016

Exploiting Order Independence for Scalable and Expressive Packet Classification

K. Kogan, S.I. Nikolenko, O. Rottenstreich, W. Culhane, P. Eugster

IEEE Transactions on Networking · pp. 1251–1264 · 2016

Mining Ethnic Content Online with Additively Regularized Topic Models

M. Apishev, S. Koltsov, O. Koltsova, S.I. Nikolenko, K. Vorontsov

Computación y Sistemas · pp. 387–403 · 2016

Large profits or fast gains: A dilemma in maximizing throughput with applications to network processors

K. Kogan, A. Lòpez-Ortiz, S.I. Nikolenko, G. Scalosub, M. Segal

Journal of Network and Computer Applications · pp. 31–43 · 2016

Online Recommender System for Radio Station Hosting Based on Information Fusion and Adaptive Tag-Aware Profiling

D. Ignatov, S.I. Nikolenko, T. Abaev, J. Poelmans

Expert Systems with Applications · pp. 546–558 · 2016

Gibbs sampler optimization for analysis of a granulated medium

S. Koltsov, S.I. Nikolenko, O. Koltsova

Technical Physics Letters · pp. 837–839 · Springer · 2016

Conference papers

Topic Quality Metrics Based on Distributed Word Representations

S.I. Nikolenko

Proc. 39th International ACM SIGIR Conference on Research and Development in Information Retrieval · SIGIR 2016 · pp. 1029–1032

BASEL (Buffering Architecture SpEcification Language)

K. Kogan, D. Menikkumbura, G. Petri, Y. Noh, S.I. Nikolenko, P. Eugster

12th ACM/IEEE Symposium on Architectures for Networking and Communications Systems · ANCS 2016 · pp. 69–74

On Demand Elastic Capacity Planning for Service Auto-scaling

P. Chuprikov, S.I. Nikolenko, K. Kogan

2016 IEEE International Conference on Computer Communications · INFOCOM 2016 · pp. 1–9

How to Represent IPv6 Forwarding Tables on IPv4 or MPLS Dataplanes

S.I. Nikolenko, K. Kogan, G. Retvari, E.R. Berczi-Kovacs, A. Shalimov

Proc. 2016 IEEE Conference on Computer Communications Workshops (INFOCOM WKSHPS): GI 2016: 9th IEEE Global Internet Symposium · IEEE GI 2016

FIB Efficiency in Distributed Platforms

K. Kogan, S.I. Nikolenko, P. Eugster, A. Shalimov, O. Rottenstreich

24th IEEE International Conference on Network Protocols · ICNP 2016 · pp. 1–10

Improving Neural Network Models for Natural Language Processing in Russian with Synonyms

R. Galinsky, A. Alekseev, S.I. Nikolenko

Proc. 5th conference on Artificial Intelligence and Natural Language · AINL 2016 · pp. 45–51

Predicting the Age of Social Network Users from User-Generated Texts with Word Embeddings

A. Alekseev, S.I. Nikolenko

Proc. 5th conference on Artificial Intelligence and Natural Language · AINL 2016 · pp. 3–13

Automated Prediction of Demographic Information from Medical User Reviews

E. Tutubalina, S.I. Nikolenko

Proc. 4th International Conference on Mining Intelligence and Knowledge Exploration · MIKE 2016 · accepted

Permalink

Additive Regularization for Topic Modeling in Sociological Studies of User-Generated Texts

M. Apishev, S. Koltsov, O. Koltsova, S.I. Nikolenko, K. Vorontsov

Proc. 15th Mexican International Conference on Artificial Intelligence · MICAI 2016 · pp. 169–184

Pseudo-Bimodal Community Detection in Twitter-Based Networks

N. Semenov, I. Zakhlebin, A. Tolmach, S.I. Nikolenko

Proc. 8th International Congress on Ultra Modern Telecommunications and Control Systems · ICUMT 2016 · pp. 336–341 · IEEE

Stable Topic Modeling with Local Density Regularization

S. Koltsov, S.I. Nikolenko, O. Koltsova, V. Filipov, S. Bodrunova

Proc. 3rd international conference on Internet Science · INSCI 2016 · pp. 176–188 · Springer

ARTM vs. LDA: an SVD Extension Case Study

S.I. Nikolenko

Proc. 5th International Conference on Analysis of Images, Social Networks, and Texts · AIST 2016 · pp. 276–282

Constructing Aspect-Based Sentiment Lexicons with Topic Modeling

E. Tutubalina, S.I. Nikolenko

Proc. 5th International Conference on Analysis of Images, Social Networks, and Texts · AIST 2016 · pp. 208–220

User Profiling in Text-Based Recommender Systems Based on Distributed Word Representations

S.I. Nikolenko, A. Alekseev

Proc. 5th International Conference on Analysis of Images, Social Networks, and Texts · AIST 2016 · pp. 196–207

Stable Topic Modeling for Web Science: Granulated LDA

S. Koltsov, S.I. Nikolenko, O. Koltsova, S. Bodrunova

Proc. 8th ACM Conference on Web Science · WebSci '16 · pp. 342–343 · 2016

2015

Journal articles

Single Cells within the Puerto Rico Trench Suggest Hadal Adaptation of Microbial Lineages

R. Leon-Zayas, M. Novotny, S. Podell, C. Shepard, E. Berkenpas, S.I. Nikolenko, P.A. Pevzner, E. Lasken, D. Bartlett

Applied and Environmental Microbiology · pp. 8265–8276 · 2015

Conference papers

Essential Traffic Parameters for Shared Memory Switch Performance

P. Eugster, A. Kesselman, K. Kogan, S.I. Nikolenko, A.V. Sirotkin

22nd International Colloquium on Structural Information and Communication Complexity · SIROCCO 2015 · pp. 61–75 · Springer

Priority Queueing with Multiple Packet Characteristics

P. Chuprikov, S.I. Nikolenko, K. Kogan

2015 IEEE International Conference on Computer Communications · INFOCOM 2015 · pp. 1418–1426

Inferring Sentiment-Based Priors in Topic Models

E. Tutubalina, S.I. Nikolenko

Proc. 14th Mexican International Conference on Artificial Intelligence · MICAI 2015 · pp. 92–104 · Springer

SVD-LDA: Topic Modeling for Full-Text Recommender Systems

S.I. Nikolenko

Proc. 14th Mexican International Conference on Artificial Intelligence · MICAI 2015 · pp. 67–79 · Springer

Detecting Opinion Polarisation on Twitter by Constructing Pseudo-Bimodal Networks of Mentions and Retweets

I. Zakhlebin, A. Semenov, A. Tolmach, S.I. Nikolenko

Proc. 9th Russian Summer School in Information Retrieval · RUSSIR 2015 · pp. 169–178 · Springer

Discerning Depression Propensity Among Participants of Suicide and Depression-Related Groups of Vk.com

A. Semenov, A. Natekin, S.I. Nikolenko, P. Upravitelev, M. Trofimov, M. Kharchenko

Proc. 4th International Conference on Analysis of Images, Social Networks, and Texts · AIST 2015 · pp. 24–35 · Springer

A Probabilistic Rating System for Team Competitions with Individual Contributions

S.I. Nikolenko

Proc. 4th International Conference on Analysis of Images, Social Networks, and Texts · AIST 2015 · pp. 3–13 · Springer

Preprints

BASEL (Buffering Architecture SpEcification Language)

K. Kogan, D. Menikkumbura, G. Petri, Y. Noh, S.I. Nikolenko, P. Eugster

arXiv · 2015

2014

Journal articles

Analysis and Interpretation of Imaging Mass Spectrometry Data by Clustering Mass-to-Charge Images According to Their Spatial Similarity

T. Alexandrov, I. Chernyavsky, M. Becker, F. von Eggeling, S.I. Nikolenko

Analytical Chemistry · pp. 11189–11195 · 2014

Conference papers

Latent Dirichlet Allocation: Stability and Applications to Studies of User-Generated content

S. Koltsov, O. Koltsova, S.I. Nikolenko

Proceedings of the 2014 ACM Conference on Web Science · WebSci 2014 · pp. 161–165

Shared-Memory Buffer Management for Heterogeneous Packet Processing

P. Eugster, K. Kogan, S.I. Nikolenko, A.V. Sirotkin

Proceedings of the 34th International Conference on Distributed Computing Systems · ICDCS 2014 · pp. 471–480 · IEEE Press

Strategies for Mitigating TCAM Space Bottlenecks

K. Kogan, S.I. Nikolenko, P. Eugster, E. Ruan

22nd IEEE Annual Symposium on High-Performance Interconnects · HOTI 2014 · pp. 25–32

SAX-PAC (Scalable And eXpressive PAcket Classification)

K. Kogan, S.I. Nikolenko, O. Rottenstreich, W. Culhane, P. Eugster

Proceedings of the 2014 ACM conference on SIGCOMM · SIGCOMM 2014 · pp. 15–26 · ACM Press

Political Actor or Ritualised Other? Mapping Ethnic Attitudes in the Russian Blogosphere by Methods of Big Data Research

S. Bodrunova, O. Koltsova, S.I. Nikolenko, S. Koltsov, S. Alekseeva

ECPR General Conference · ECPR 2014

Measuring Topic Quality in Latent Dirichlet Allocation

S.I. Nikolenko, S. Koltsov, O. Koltsova

Proc. Philosophy, Mathematics, Linguistics: Aspects of Interaction · PhML-2014 · pp. 149–157

Permalink

Online recommender system for radio station hosting: experimental results revisited

D. Ignatov, S.I. Nikolenko, T. Abaev, N. Konstantinova

Proceedings of 2014 IEEE/WIC/ACM International Joint Conferences on Web Intelligence (WI) and Intelligent Agent Technologies (IAT) · WIC 2014 · pp. 229–236

Balancing Work and Size with Bounded Buffers

K. Kogan, A. Lòpez-Ortiz, S.I. Nikolenko, G. Scalosub

Proc. 6th International Conference on Communication Systems and Networks · COMSNETS 2014 · pp. 1–8 · IEEE Press

Book chapters

Single and Multiple Buffer Processing

S.I. Nikolenko, K. Kogan

Encyclopaedia of Algorithms · pp. 1–9 · Springer · 2014

Preprints

2013

Journal articles

A Complete One-Way Function based on a Finite Rank Free ℤ×ℤ-module

S.I. Nikolenko, D. Tugaryov

Journal of Mathematical Sciences · pp. 307–315 · 2013

Feebly Secure Cryptographic Primitives

E.A. Hirsch, S.I. Nikolenko

Journal of Mathematical Sciences · pp. 17–34 · 2013

Circuit Complexity of Linear Functions: Gate Elimination and Feeble Security

A. Davydow, S.I. Nikolenko

Journal of Mathematical Sciences · pp. 35–43 · 2013

BayesHammer: Bayesian clustering for error correction in single-cell sequencing

S.I. Nikolenko, A. Korobeynikov, M. Alekseyev

BMC Genomics · article S7 · 2013

Conference papers

Interval Semi-Supervised LDA: Classifying Needles in a Haystack

S. Bodrunova, S. Koltsov, O. Koltsova, S.I. Nikolenko, A. Shimorina

Proc. 12th Mexican International Conference on Artificial Intelligence · MICAI 2013 · pp. 265–274 · Springer

Semi-Supervised Tag Extraction in a Web Recommender System

V.A. Leksin, S.I. Nikolenko

Proc. 6th International Conference on Similarity Search and Applications · SISAP 2013 · pp. 206–212 · Springer

Multi-Queued Network Processors for Packets with Heterogeneous Processing Requirements

K. Kogan, A. Lòpez-Ortiz, S.I. Nikolenko, A.V. Sirotkin

Proc. 5th International Conference on Communication Systems and Networks · COMSNETS 2013 · pp. 1–8 · IEEE Press

Efficient demand assignment in multi-connected microgrids

K. Kogan, S.I. Nikolenko, S. Keshav, A. Lòpez-Ortiz

Proc. 4th Energy-Efficient Computing and Networking · e-Energy 2013 · pp. 277–278

Towards efficient implementation of packet classifiers in SDN/OpenFlow

K. Kogan, S.I. Nikolenko, W. Culhane, P. Eugster, E. Ruan

Proc. 2nd ACM SIGCOMM Workshop on Hot Topics in Software Defined Networking · HotSDN 2013 · pp. 153–154

Efficient Demand Assignment in Multi-Connected Microgrids with a Shared Central Grid

K. Kogan, S.I. Nikolenko, S. Keshav, A. Lòpez-Ortiz

Proc. 3rd IFIP Conference on Sustainable Internet and ICT for Sustainability 2013 · SustainIT 2013

Preprints

2012

Journal articles

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

A. Bankevich, S. Nurk, D. Antipov, A. Gurevich, M. Dvorkin, A.S. Kulikov, V.M. Lesin, S.I. Nikolenko, S. Pham, A.D. Prjibelski, A. Pyshkin, A.V. Sirotkin, N. Vyahhi, G. Tesler, M. Alekseyev, P.A. Pevzner

Journal of Computational Biology · pp. 455–477 · 2012

Continuous hard-to-invert functions and biometric authentication

D. Grigoriev, S.I. Nikolenko

Groups – Complexity – Cryptology · pp. 19–32 · 2012

Segmentation of MALDI imaging results based on graphical models

I. Chernyavsky, T. Alexandrov, S.I. Nikolenko

SPIIRAS Proceedings · pp. 120–142 · 2012 · In Russian

Bayesian rating systems with additional information on tournament results

S.I. Nikolenko, D.V. Serdyuk, A.V. Sirotkin

SPIIRAS Proceedings · pp. 189–204 · 2012 · In Russian

A survey of user behaviour models for search results ranking

A. Fishkov, S.I. Nikolenko

SPIIRAS Proceedings · pp. 139–175 · 2012 · In Russian

SCM: a new user behaviour model for web search

A. Fishkov, S.I. Nikolenko

SPIIRAS Proceedings · pp. 72–100 · 2012 · In Russian

Conference papers

A Two-Step Soft Segmentation Procedure for MALDI Imaging Mass Spectrometry Data

I. Chernyavsky, T. Alexandrov, P. Maass, S.I. Nikolenko

Proceedings of the 18th German Conference in Bioinformatics · GCB-2012 · pp. 39–48

Online Recommender System for Radio Station Hosting

D. Ignatov, A. Konstantinov, S.I. Nikolenko, J. Poelmans, V. Zaharchuk

Proceedings of BIR 2012 · pp. 1–12 · Springer

A New Recommender System for the Interactive Radio Network FMhost

S.I. Nikolenko

Proceedings of EEML 2012, an ICFCA 2012 workshop · pp. 72–85

A New Click Model for Relevance Prediction in Web Search

A. Fishkov, S.I. Nikolenko

Proceedings of EEML 2012, an ICFCA 2012 workshop · pp. 45–54

FIFO Queueing Policies for Packets with Heterogeneous Processing

K. Kogan, A. Lòpez-Ortiz, S.I. Nikolenko, A.V. Sirotkin, D. Tugaryov

Proc. 1st Mediterranean Conference on Algorithms · MedAlg 2012 · pp. 248–260 · Springer

A Taxonomy of Semi-FIFO Policies

K. Kogan, A. Lòpez-Ortiz, S.I. Nikolenko, A.V. Sirotkin

Proc. 31st IEEE International Performance Computing and Communications Conference · IPCCC 2012 · pp. 295–304 · IEEE Press

Book chapters

The Markov School in the 21st Century

S.I. Nikolenko

Logic in Central and Eastern Europe: History, Science and Discourse · pp. 388–427 · University Press of America · 2012

History of the Leningrad (St. Petersburg) School of Constructive Mathematics and Proof Theory

G.E. Mints, S.I. Nikolenko

Logic in Central and Eastern Europe: History, Science and Discourse · pp. 380–387 · University Press of America · 2012

Provably Secure Cryptographic Constructions

S.I. Nikolenko

Cryptography and Security in Computing · pp. 3–22 · InTech · 2012

2011

Books

Provably Secure Constructions in Cryptography

S.I. Nikolenko

Lambert Academic Publishing · 2011

Journal articles

A Probabilistic Graphical Model for the Music Harmony Similarity Problem

I. Baltiysky, S.I. Nikolenko

SPIIRAS Proceedings · pp. 136–163 · 2011 · In Russian

Probabilistic Graphical Models of Harmony in Automated Music Analysis: a Survey

I. Baltiysky, S.I. Nikolenko

SPIIRAS Proceedings · pp. 174–196 · 2011 · In Russian

Conference papers

Gate Elimination for Linear Functions and New Feebly Secure Constructions

A. Davydow, S.I. Nikolenko

Proceedings of the 6th Computer Science Symposium in Russia · CSR 2011 · pp. 148–161

New Formulations for the Genome Assembly Problem

S.I. Nikolenko, M. Alekseyev

Proceedings of the 5th International Moscow Conference on Computational Molecular Biology · MCCMB 2011 · pp. 251–252

A New Bayesian Rating System for Team Competitions

S.I. Nikolenko, A.V. Sirotkin

Proceedings of the 28th International Conference on Machine Learning · ICML 2011 · pp. 601–608

Posters

Predicting DNA Replication Origins with Machine Learning Techniques

M. Churakov, S.I. Nikolenko, Y. Porozov

ISMB/ECCB 2011

Permalink

Protein conformational movements modeling based on the average action principle

A. Krass, S.I. Nikolenko, E. Stepanov, Y. Porozov

ISMB/ECCB 2011

Permalink

Bayesian Evaluation of de novo Genome Assembly

S.I. Nikolenko, M. Alekseyev, P.A. Pevzner

ISMB/ECCB 2011

Permalink

2010

Conference papers

Extensions of the TrueSkillTM rating system

S.I. Nikolenko, A.V. Sirotkin

Proceedings of the 9th International Conference on Applications of Fuzzy Systems and Soft Computing · ICAFS 2010 · pp. 151–160

Fuzzy computing via multiagent negotiations

I. Gnilomedov, S.I. Nikolenko

Proceedings of the 9th International Conference on Applications of Fuzzy Systems and Soft Computing · ICAFS 2010 · pp. 210–220

Permalink

Agent-Based Economic Modeling with Finite State Machines

I. Gnilomedov, S.I. Nikolenko

Proceedings of the 36th Annual Convention of the Society for the Study of Artificial Intelligence and Simulation of Behaviour · AISB 2010

2009

Books

Learning Systems

S.I. Nikolenko, A.L. Tulupyev

MCCME Press, Moscow · 2009 · In Russian

Mechanism design theory

S.I. Nikolenko

Intuit, Moscow · 2009 · In Russian

Bayesian belief networks: probabilistic logic inference on directed acyclic graphs

A.L. Tulupyev, A.V. Sirotkin, S.I. Nikolenko

SPSU Press, St. Petersburg · 2009

Permalink

Journal articles

The Event Bush as a Semantic-based Numerical Approach to Natural Hazard Assessment (Exemplified by Volcanology)

C.A. Pshenichny, S.I. Nikolenko, R. Carniel, P.A. Vaganov, Z.V. Khrabrykh, V.P. Moukhachov, V.L. Akimova-Shterkhun, A.A. Rezyapkin

Computers and Geosciences · pp. 1017–1034 · 2009

The event bush formalism for knowledge representation and probabilistic inference in geological hazard evaluation

C.A. Pshenichny, S.I. Nikolenko, A.V. Yakovlev

Geoinformatics · pp. 62–71 · 2009 · In Russian

Permalink

A2-proof of structure theorems for Chevalley groups of type F4

N.A. Vavilov, S.I. Nikolenko

St. Petersburg Mathematical Journal · pp. 527–551 · 2009

Motivic decomposition of anisotropic varieties of type F4 into generalized Rost motives

S.I. Nikolenko, N. Semenov, K. Zainoulline

Journal of K-Theory · pp. 85–102 · 2009

On Complete One-Way Functions

A. Kojevnikov, S.I. Nikolenko

Problems of Information Transmission · pp. 101–118 · 2009

Conference papers

A feebly secure trapdoor function

E.A. Hirsch, S.I. Nikolenko

Proceedings of the 4th Computer Science Symposium in Russia · CSR 2009 · pp. 129–142

Bayesian Inference in Rating Systems: a Survey

S.I. Nikolenko, A.V. Sirotkin

Proc. SoftComp 2009 · pp. 29–48 · In Russian

Permalink

Other

2008

Journal articles

Algebraic Cryptography: New Constructions and Their Security against Provable Break

D. Grigoriev, A. Kojevnikov, S.I. Nikolenko

St. Petersburg Mathematical Journal · pp. 119–147 · 2008

Complexity of Semialgebraic Proofs with Restricted Degree of Falsity

E.A. Hirsch, A. Kojevnikov, A.S. Kulikov, S.I. Nikolenko

Journal of Satisfiability · pp. 53–69 · 2008

Conference papers

Spatial Volcanic Hazard Assessment by the Event Bush Method

S.I. Nikolenko, C.A. Pshenichny, A. Sobissevich, A.V. Yakovlev

XXIV IUGG General Assembly, Perugia, Italy · 2008

Permalink

The Event Bush as a Potential Complex Methodology of Conceptual Modeling in Geosciences

C.A. Pshenichny, S.I. Nikolenko, R. Carniel, A. Sobissevich, P.A. Vaganov, Z.V. Khrabrykh, V.P. Moukhachov, V.L. Shterkhun, A.A. Rezyapkin, A.V. Yakovlev, R.A. Fedukov, E.A. Gusev

Proceedings of iEMSs'08: International Congress on Environmental Modelling and Software · 2008

Learning Conditional Probabilities in Event Bushes with Temporal Labels

S.I. Nikolenko, C.A. Pshenichny, R. Carniel

Proceedings of iEMSs'08: International Congress on Environmental Modelling and Software · 2008

New Combinatorial Complete One-Way Functions

A. Kojevnikov, S.I. Nikolenko

Proceedings of the 25th International Symposium on Theoretical Aspects of Computer Science, Bordeaux, France · STACS 2008 · pp. 457–466

Preprints

2007

Journal articles

Temporal Assessment by Means of an Event Bush

S.I. Nikolenko, C.A. Pshenichny

Geophysical Research Abstracts · pp. 497 · 2007

Structure of Chevalley Groups: the Proof from the Book

M. Gavrilovich, S.I. Nikolenko, N.A. Vavilov

Journal of Mathematical Sciences · pp. 626–645 · 2007

Preprints

2006

Books

Bayesian Networks: A Probabilistic Logic Approach

A.L. Tulupyev, S.I. Nikolenko, A.V. Sirotkin

St.-Petersburg, Nauka · 2006 · In Russian

Journal articles

A posteriori probability estimates with probabilistic evidence in intellectual informational systems with interval probabilities

A.L. Tulupyev, S.I. Nikolenko, A.V. Sirotkin

Priborostroenie · pp. 39–44 · 2006 · In Russian

Permalink

A posteriori estimates of statement probabilities in intellectual informational systems: deterministic case

A.L. Tulupyev, S.I. Nikolenko, D.A. Nikitin, A.V. Sirotkin

Priborostroenie · pp. 35–39 · 2006 · In Russian

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Coordinated estimates of probabilities of statements in intellectual informational systems

A.L. Tulupyev, A.V. Sirotkin, S.I. Nikolenko

Priborostroenie · pp. 20–26 · 2006 · In Russian

Preprints

Chow ring structure made simple

S.I. Nikolenko, N. Semenov

arXiv · 2006

2005

Conference papers

Directed Cycles in Bayesian Belief Networks: Probabilistic Semantics and Consistency Checking Complexity

A.L. Tulupyev, S.I. Nikolenko

Proceedings of the 4th Mexican International Conference on Artificial Intelligence · MICAI-2005 · pp. 214–223

Simulating Cutting Planes proofs with restricted degree of falsity by Resolution

E.A. Hirsch, S.I. Nikolenko

Proceedings of SAT'05 · pp. 135–142 · Springer · 2005

Preprints

Other

2004

Preprints

First report on the semialgebraic prover

S. Fedin, A. Kojevnikov, B. Konev, A.S. Kulikov, S.I. Nikolenko, V.P. Orevkov

Preprint · 2004

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2003

Journal articles

Hard satisfiable instances for DPLL-type algorithms

S.I. Nikolenko

Journal of Mathematical Sciences · pp. 139–149 · 2003

Conference papers

Worst-case upper bounds for SAT: automated proof

S.I. Nikolenko, A.V. Sirotkin

Student Session Proceedings, 15th European Summer School in Logic, Language, and Information, Vienna, Austria · ESSLLI 2003 · pp. 225–232